Ontology

• pathology ontology
  9 February 2019

  Definition : An ontology of human pathology.

• GO annotation
  12 October 2015

  Gene Ontology Annotation; GO annotations
  See also
  Biological ontologies
  Gene Ontology Data
  Gene Ontology Tools
  Gene Ontology Documentation
  References
  P-Finder: Reconstruction of Signaling Networks from Protein-Protein Interactions and GO Annotations. Young-Rae Cho, Yanan Xin, Speegle G. IEEE/ACM Trans Comput Biol Bioinfor

• granularity
  12 October 2015

  WP
  Granularity is the extent to which a material or system is composed of distinguishable pieces or grains. It can either refer to the extent to which a larger entity is subdivided, or the extent to which groups of smaller indistinguishable entities have joined together to become larger distinguishable entities.
  For example, a kilometer broken into centimeters has finer granularity than a kilometer broken into meters. In contrast, molecules of photographic emulsion may clump together to (...)

• metadata
  12 October 2015

  WP
  Metadata is "data about data".
  Two types of metadata exist:
  structural metadata Structural metadata is data about the containers of data.
  descriptive metadata. Descriptive metadata uses individual instances of application data or the data content.
  Metadata was traditionally in the card catalogs of libraries. As information has become increasingly digital, metadata is also used to describe digital data using metadata standards specific to a particular discipline. Describing (...)

• semantic annotation
  12 October 2015

  See also
  Semantic Web for the Life Sciences (SWLS)
  Open References
  Semantic biomedical resource discovery: a Natural Language Processing framework. Sfakianaki P, Koumakis L, Sfakianakis S, Iatraki G, Zacharioudakis G, Graf N, Marias K, Tsiknakis M. BMC Med Inform Decis Mak. 2015 Sep 30;15:77. doi:10.1186/s12911-015-0200-4 . PMID: #26423616# (Free)
  Automated semantic annotation of rare disease cases: a case study. Taboada M, Rodríguez H, Martínez D, Pardo M, Sobrido MJ. Database (...)

• ICD-10
  22 September 2014

  ICD-10 represents the 10th revision of the International Statistical Classification of Diseases and Related Health Problems (usually referred to as “ICD”), now overseen by the World Health Organization (WHO).
  The overall goal of the ICD project is to standardize medical diagnosis and track diseases worldwide with the use of uniform codes to improve consistency among physicians and hospitals in recording patient symptoms and diagnoses. These systems are now also used to more accurately (...)

• ontology-anchored natural language
  31 October 2011

  Open References
  Evaluation of an Ontology-anchored Natural Language-based Approach for Asserting Multi-scale Biomolecular Networks for Systems Medicine. Borlawsky TB, Li J, Shagina L, Crowson MG, Liu Y, Friedman C, Lussier YA. AMIA Summits Transl Sci Proc. 2010 Mar 1;2010:6-10. PMID: #21347135# [Free]

• semantic web in medecine
  14 July 2008

  See also
  Semantic Web for the Life Sciences (SWLS)
  Open References
  Semantic biomedical resource discovery: a Natural Language Processing framework. Sfakianaki P, Koumakis L, Sfakianakis S, Iatraki G, Zacharioudakis G, Graf N, Marias K, Tsiknakis M. BMC Med Inform Decis Mak. 2015 Sep 30;15:77. doi:10.1186/s12911-015-0200-4 . PMID: #26423616# (Free)
  Automated semantic annotation of rare disease cases: a case study. Taboada M, Rodríguez H, Martínez D, Pardo M, Sobrido MJ. Database (...)

• automated concept mapping
  6 July 2008

  References
  Sun Y. Methods for automated concept mapping between medical databases. J Biomed Inform. 2004 Jun;37(3):162-78. PMID: #15196481#
  Elkin PL, Brown SH. Automated enhancement of description logic-defined terminologies to facilitate mapping to ICD9-CM. J Biomed Inform. 2002 Oct-Dec;35(5-6):281-8. PMID: #12968776#

• DAG edit
  17 October 2007

  DAG is an ontology editor used for the Gene Ontology at OBO.

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