Molecular biology
somatic mutations in PTCH and PTCH2 genes
allelotyping
expression profiling: #14500378#
Cytogenetics
17p deletion (TP53, KCTD11)
Allelotyping (#11857089#)
Region | LOH% | Genes |
1p32 | - | PTCH2 |
5q22 | - | APC |
7q | 58.3% | |
8p22-23.1 | 66.7% | - |
9q22.3 | - | PTCH1 |
10q24-q25 | ||
10q25.3-q26.1 | ||
11q24.1-qter | ||
16q | 58.3% | |
17p13.1-p12 | 58.3% | TP53 |
17q | 66.7% |
Gene inactivating mutations
PTCH2 | 1p32 | MIM.603673 |
APC | 5q21-5q22 | MIM.175100 |
SUFU | 10q24-q25 | MIM.607035 |
BRCA2 | 13q12.3 | MIM.600185 |
Gene activating mutations
CTNNB1 | 3p22-p21.3 | MIM.116806 |
Gene amplification
MYC amplification
Differential diagnosis
atypical teratoid/rhabdoid tumor (ATRT)
Predispositions
Fanconi anemia (Fanconi syndrome)
References
Ferretti E, Smaele ED, Marcotullio LD, Screpanti I, Gulino A. Hedgehog checkpoints in medulloblastoma: the chromosome 17p deletion paradigm. Trends Mol Med. 2005 Dec;11(12):537-45. PMID: #16290230#