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array CGH

Thursday 20 November 2003

See also

- CGH
- exon array CGH
- joined CNA-gene expression profiling study (#17229543#)
- clinical applications of CGH array in oncology

References

- Emanuel BS, Saitta SC. From microscopes to microarrays: dissecting recurrent chromosomal rearrangements. Nat Rev Genet. 2007 Nov;8(11):869-83. PMID: #17943194#

- Yang S, Jeung HC, Jeong HJ, Choi YH, Kim JE, Jung JJ, Rha SY, Yang WI, Chung HC. Identification of genes with correlated patterns of variations in DNA copy number and gene expression level in gastric cancer. Genomics. 2007 Jan 15; PMID: #17229543#

- Pinkel D, Albertson DG. Array comparative genomic hybridization and its applications in cancer. Nat Genet. 2005 Jun;37 Suppl:S11-7. PMID: #15920524#

- Lieu PT, Jozsi P, Gilles P, Peterson T. Development of a DNA-labeling system for array-based comparative genomic hybridization. J Biomol Tech. 2005 Jun;16(2):104-11. PMID: #16030317#

- Little SE, Vuononvirta R, Reis-Filho JS, Natrajan R, Iravani M, Fenwick K, Mackay A, Ashworth A, Pritchard-Jones K, Jones C. Array CGH using whole genome amplification of fresh-frozen and formalin-fixed, paraffin-embedded tumor DNA. Genomics. 2006 Feb;87(2):298-306. PMID: #16271290#

- Ylstra B, van den Ijssel P, Carvalho B, Brakenhoff RH, Meijer GA. BAC to the future! or oligonucleotides: a perspective for micro array comparative genomic hybridization (array CGH). Nucleic Acids Res. 2006 Jan 26;34(2):445-50. PMID: #16439806#

- Dhami P, Coffey AJ, Abbs S, Vermeesch JR, Dumanski JP, Woodward KJ, Andrews RM, Langford C, Vetrie D. Exon Array CGH: Detection of Copy-Number Changes at the Resolution of Individual Exons in the Human Genome. Am J Hum Genet. 2005 Mar 8;76(5) PMID: #15756638#

- Barrett MT, Scheffer A, Ben-Dor A, Sampas N, Lipson D, Kincaid R, Tsang P, Curry B, Baird K, Meltzer PS, Yakhini Z, Bruhn L, Laderman S. Comparative genomic hybridization using oligonucleotide microarrays and total genomic DNA. Proc Natl Acad Sci U S A. 2004 Dec 21;101(51):17765-70. PMID: #15591353#

- Mantripragada KK, Buckley PG, de Stahl TD, Dumanski JP. Genomic microarrays in the spotlight. Trends Genet. 2004 Feb;20(2):87-94. PMID: #14746990#

- Albertson DG, Pinkel D. Genomic microarrays in human genetic disease and cancer. Hum Mol Genet. 2003 Oct 15;12 Spec No 2:R145-52. Epub 2003 Aug 05. PMID: #12915456#

- Pollack JR, Perou CM, Alizadeh AA, Eisen MB, Pergamenschikov A, Williams CF, Jeffrey SS, Botstein D, Brown PO. Genome-wide analysis of DNA copy-number changes using cDNA microarrays. Nat Genet. 1999 Sep;23(1):41-6. PMID: #10471496#

- Pinkel D, Segraves R, Sudar D, Clark S, Poole I, Kowbel D, Collins C, Kuo WL, Chen C, Zhai Y, Dairkee SH, Ljung BM, Gray JW, Albertson DG. High resolution analysis of DNA copy number variation using comparative genomic hybridization to microarrays. Nat Genet. 1998 Oct;20(2):207-11. PMID: #9771718#