human disease network
Wednesday 2 July 2008
A network of disorders and disease genes linked by known disorder-gene associations offers a platform to explore in a single graph-theoretic framework all known phenotype and disease gene associations, indicating the common genetic origin of many diseases.
Genes associated with similar disorders show both higher likelihood of physical interactions between their products and higher expression profiling similarity for their transcripts, supporting the existence of distinct disease-specific functional modules.
Essential human genes are likely to encode hub proteins and are expressed widely in most tissues. This suggests that disease genes also would play a central role in the human interactome.
However, the vast majority of disease genes are nonessential and show no tendency to encode hub proteins, and their expression pattern indicates that they are localized in the functional periphery of the network.
A selection-based model explains the observed difference between essential and disease genes and also suggests that diseases caused by somatic mutations should not be peripheral, a prediction confirmed for cancer genes.
The expanded human disease network combining protein-protein interaction information. Zhang X, Zhang R, Jiang Y, Sun P, Tang G, Wang X, Lv H, Li X. Eur J Hum Genet. 2011 Jul;19(7):783-8. PMID: 21386875
Goh KI, Cusick ME, Valle D, Childs B, Vidal M, Barabási AL. The human disease network. Proc Natl Acad Sci U S A. 2007 May 22;104(21):8685-90. PMID: 17502601