SNP genotyping

Biotechs > SNP microarrays

 Sequenom
 Illumina
 Beckman Coulter GenomeLab™ SNPstream® Genotyping Series

Biotechs > Service providers in SNP genotyping

 Geneblitz
 Illumina
 K Biosciences

See also

 Genotyping

 SNP genotyping applications

• SNP tumoral genotyping (SNP cancer genotyping)
• SNP genotyping in malformation study

References

 Kohler JR, Cutler DJ. Simultaneous discovery and testing of deletions for disease association in SNP genotyping studies. Am J Hum Genet. 2007 Oct;81(4):684-99. PMID: 17846995

Reviews

 Fan JB, Chee MS, Gunderson KL. Highly parallel genomic assays. Nat Rev Genet. 2006 Aug;7(8):632-44. PMID: 16847463

 Gunderson KL, Steemers FJ, Ren H, Ng P, Zhou L, Tsan C, Chang W, Bullis D, Musmacker J, King C, Lebruska LL, Barker D, Oliphant A, Kuhn KM, Shen R. Whole-genome genotyping. Methods Enzymol. 2006;410:359-76. PMID: 16938560

 Shen R, Fan JB, Campbell D, Chang W, Chen J, Doucet D, Yeakley J, Bibikova M, Wickham Garcia E, McBride C, Steemers F, Garcia F, Kermani BG, Gunderson K, Oliphant A. High-throughput SNP genotyping on universal bead arrays. Mutat Res. 2005 Jun 3;573(1-2):70-82. PMID: 15829238

 Murray SS, Oliphant A, Shen R, McBride C, Steeke RJ, Shannon SG, Rubano T, Kermani BG, Fan JB, Chee MS, Hansen MS. A highly informative SNP linkage panel for human genetic studies. Nat Methods. 2004 Nov;1(2):113-7. PMID: 15782173

 Fan JB, Oliphant A, Shen R, Kermani BG, Garcia F, Gunderson KL, Hansen M, Steemers F, Butler SL, Deloukas P, Galver L, Hunt S, McBride C, Bibikova M, Rubano T, Chen J, Wickham E, Doucet D, Chang W, Campbell D, Zhang B, Kruglyak S, Bentley D, Haas J, Rigault P, Zhou L, Stuelpnagel J, Chee MS. Highly parallel SNP genotyping. Cold Spring Harb Symp Quant Biol. 2003;68:69-78. PMID: 15338605

 Barker DL, Hansen MS, Faruqi AF, Giannola D, Irsula OR, Lasken RS, Latterich M, Makarov V, Oliphant A, Pinter JH, Shen R, Sleptsova I, Ziehler W, Lai E. Two methods of whole-genome amplification enable accurate genotyping across a 2320-SNP linkage panel. Genome Res. 2004 May;14(5):901-7. PMID: 15123587